Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Gm11421-201ENSMUST00000122124 294 ntBASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.66□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms