Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-4A0A0G2JG01 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-4A0A0G2JG01 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13n-4A0A0G2JG01 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Trav13n-4A0A0G2JG01 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13n-4A0A0G2JG01 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13n-4A0A0G2JG01 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trav13n-4A0A0G2JG01 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm11927-201ENSMUST00000118472 759 ntBASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm11643-201ENSMUST00000119578 864 ntBASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Idnk-204ENSMUST00000226010 1898 ntBASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-4A0A0G2JG01 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm9987-201ENSMUST00000069768 567 ntBASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm5417-201ENSMUST00000079706 384 ntBASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-4A0A0G2JG01 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms