Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Timm23-208ENSMUST00000226683 750 ntBASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13n-1A0A0G2JEU8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13n-1A0A0G2JEU8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13n-1A0A0G2JEU8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.46□□□□□ -0.42
Trav13n-1A0A0G2JEU8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms