Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9-4A0A0B4J1K2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm24841-201ENSMUST00000158676 357 ntBASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-4A0A0B4J1K2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-4A0A0B4J1K2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Timm23-208ENSMUST00000226683 750 ntBASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-4A0A0B4J1K2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav9-4A0A0B4J1K2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav9-4A0A0B4J1K2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav9-4A0A0B4J1K2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-4A0A0B4J1K2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms