Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav11A0A0B4J1J9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav11A0A0B4J1J9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav11A0A0B4J1J9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav11A0A0B4J1J9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Trav11A0A0B4J1J9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav11A0A0B4J1J9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Gm42778-201ENSMUST00000199644 553 ntBASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav11A0A0B4J1J9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Haglr-201ENSMUST00000100000 2085 ntBASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav11A0A0B4J1J9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav11A0A0B4J1J9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms