Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv5-43A0A0B4J1J2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gm13186-201ENSMUST00000118031 316 ntBASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gm5587-201ENSMUST00000206270 674 ntBASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms