Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv20A0A0B4J1H5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm12821-201ENSMUST00000120022 600 ntBASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv20A0A0B4J1H5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm13234-201ENSMUST00000120010 747 ntBASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv20A0A0B4J1H5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms