Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv16A0A0B4J1H3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm10138-203ENSMUST00000206952 366 ntBASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv16A0A0B4J1H3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv16A0A0B4J1H3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trbv16A0A0B4J1H3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.46□□□□□ -0.42
Trbv16A0A0B4J1H3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Trbv16A0A0B4J1H3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv16A0A0B4J1H3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv16A0A0B4J1H3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Mir5133-201ENSMUST00000174955 77 ntBASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv16A0A0B4J1H3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms