Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trbv2A0A0B4J1G8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv2A0A0B4J1G8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv2A0A0B4J1G8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv2A0A0B4J1G8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv2A0A0B4J1G8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Gm42642-201ENSMUST00000200683 355 ntBASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv2A0A0B4J1G8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Gm11927-201ENSMUST00000118472 759 ntBASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv2A0A0B4J1G8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv2A0A0B4J1G8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv2A0A0B4J1G8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv2A0A0B4J1G8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trbv2A0A0B4J1G8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv2A0A0B4J1G8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv2A0A0B4J1G8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv2A0A0B4J1G8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv2A0A0B4J1G8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv2A0A0B4J1G8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv2A0A0B4J1G8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv2A0A0B4J1G8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Mir6349-201ENSMUST00000184059 97 ntBASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Trbv2A0A0B4J1G8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms