Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.27□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv3-4A0A0A6YXF1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Mir8112-201ENSMUST00000184382 131 ntBASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm24589-201ENSMUST00000116692 94 ntBASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv3-4A0A0A6YXF1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm44771-201ENSMUST00000206975 626 ntBASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm18115-201ENSMUST00000221209 621 ntBASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms