Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.2□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ighv1-11A0A0A6YWI9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.2□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gm5408-201ENSMUST00000197998 747 ntBASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gm13148-201ENSMUST00000118892 745 ntBASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gm26524-201ENSMUST00000192339 390 ntBASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gm38285-201ENSMUST00000192928 922 ntBASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gm37179-201ENSMUST00000194862 823 ntBASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.17□□□□□ -0.46
Ighv1-11A0A0A6YWI9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms