Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Gm27405-201ENSMUST00000184201 112 ntBASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Gm2399-201ENSMUST00000104944 225 ntBASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Zfp783-201ENSMUST00000095946 670 ntBASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ighv1-23A0A0A6YVW3 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms