Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav21-dv12A0A075B6C4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm13401-201ENSMUST00000117074 291 ntBASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm10138-203ENSMUST00000206952 366 ntBASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Dio3-201ENSMUST00000097228 1449 ntBASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav21-dv12A0A075B6C4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Mir8112-201ENSMUST00000184382 131 ntBASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Trav21-dv12A0A075B6C4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm15375-201ENSMUST00000119510 849 ntBASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Mir6349-201ENSMUST00000184059 97 ntBASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav21-dv12A0A075B6C4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm11249-201ENSMUST00000117071 859 ntBASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav21-dv12A0A075B6C4 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms