Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-7A0A075B6B0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Gm2399-201ENSMUST00000104944 225 ntBASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-7A0A075B6B0 Dio3-201ENSMUST00000097228 1449 ntBASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Flg-201ENSMUST00000050758 1488 ntBASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-7A0A075B6B0 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-7A0A075B6B0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-7A0A075B6B0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms