Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6n-7A0A075B6A6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm37055-201ENSMUST00000191866 133 ntBASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm10252-201ENSMUST00000209541 832 ntBASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm5417-201ENSMUST00000079706 384 ntBASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav6n-7A0A075B6A6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm21814-202ENSMUST00000203277 873 ntBASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm3375-201ENSMUST00000203929 796 ntBASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6n-7A0A075B6A6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm37025-201ENSMUST00000195159 829 ntBASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6n-7A0A075B6A6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Gm7638-201ENSMUST00000121348 967 ntBASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6n-7A0A075B6A6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms