Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Gm12896-201ENSMUST00000118430 226 ntBASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-4A0A075B652 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Dio3-201ENSMUST00000097228 1449 ntBASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav5-4A0A075B652 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Gm10138-203ENSMUST00000206952 366 ntBASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav5-4A0A075B652 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.37□□□□□ -0.11
Trav5-4A0A075B652 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Gm13401-201ENSMUST00000117074 291 ntBASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Mir6349-201ENSMUST00000184059 97 ntBASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Mir8112-201ENSMUST00000184382 131 ntBASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav5-4A0A075B652 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms