Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav13-1A0A075B644 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Gm10517-202ENSMUST00000192970 758 ntBASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13-1A0A075B644 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Odf3b-204ENSMUST00000227834 930 ntBASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Trav13-1A0A075B644 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Gm12085-201ENSMUST00000119263 940 ntBASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13-1A0A075B644 Gm21814-202ENSMUST00000203277 873 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms