Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Gm14117-201ENSMUST00000122417 843 ntBASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav8-1A0A075B641 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav8-1A0A075B641 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav8-1A0A075B641 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav8-1A0A075B641 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav8-1A0A075B641 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Gm45102-201ENSMUST00000207427 857 ntBASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8-1A0A075B641 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8-1A0A075B641 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Gm12922-201ENSMUST00000120626 809 ntBASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms