Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Gm29791-202ENSMUST00000207888 369 ntBASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16nA0A075B634 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16nA0A075B634 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Nespas-201ENSMUST00000143738 1083 ntBASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Gm6420-201ENSMUST00000193885 723 ntBASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16nA0A075B634 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Gm10418-201ENSMUST00000100943 576 ntBASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Mir8112-201ENSMUST00000184382 131 ntBASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav16nA0A075B634 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms