Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Flg-201ENSMUST00000050758 1488 ntBASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm7291-201ENSMUST00000199147 382 ntBASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm42642-201ENSMUST00000200683 355 ntBASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm7290-201ENSMUST00000104990 617 ntBASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm12918-201ENSMUST00000120234 636 ntBASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm15710-201ENSMUST00000121821 636 ntBASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm5075-201ENSMUST00000196916 622 ntBASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 AV356131-201ENSMUST00000206201 750 ntBASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15d-1-dv6d-1A0A075B624 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms