Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Gm17661-201ENSMUST00000170317 270 ntBASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Gm8520-201ENSMUST00000186517 868 ntBASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv4A0A075B5I2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Mir1199-201ENSMUST00000117015 119 ntBASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv4A0A075B5I2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv4A0A075B5I2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv4A0A075B5I2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv4A0A075B5I2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv4A0A075B5I2 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.23■□□□□ 0.35
Trbv4A0A075B5I2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv4A0A075B5I2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv4A0A075B5I2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv4A0A075B5I2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv4A0A075B5I2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv4A0A075B5I2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Gm12085-201ENSMUST00000119263 940 ntBASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Trbv4A0A075B5I2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv4A0A075B5I2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trbv4A0A075B5I2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trbv4A0A075B5I2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv4A0A075B5I2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms