Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ss18Q62280 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.5■□□□□ 0.39
Ss18Q62280 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ss18Q62280 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.5■□□□□ 0.39
Ss18Q62280 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ss18Q62280 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ss18Q62280 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ss18Q62280 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.49■□□□□ 0.39
Ss18Q62280 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Ss18Q62280 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.49■□□□□ 0.39
Ss18Q62280 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ss18Q62280 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ss18Q62280 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.48■□□□□ 0.39
Ss18Q62280 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ss18Q62280 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ss18Q62280 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ss18Q62280 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.46■□□□□ 0.39
Ss18Q62280 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ss18Q62280 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ss18Q62280 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ss18Q62280 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ss18Q62280 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ss18Q62280 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ss18Q62280 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ss18Q62280 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ss18Q62280 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ss18Q62280 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ss18Q62280 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ss18Q62280 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ss18Q62280 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ss18Q62280 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ss18Q62280 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ss18Q62280 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ss18Q62280 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ss18Q62280 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ss18Q62280 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ss18Q62280 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ss18Q62280 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ss18Q62280 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ss18Q62280 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ss18Q62280 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ss18Q62280 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ss18Q62280 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Ss18Q62280 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ss18Q62280 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ss18Q62280 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ss18Q62280 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ss18Q62280 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ss18Q62280 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ss18Q62280 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ss18Q62280 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ss18Q62280 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ss18Q62280 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ss18Q62280 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ss18Q62280 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ss18Q62280 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ss18Q62280 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ss18Q62280 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ss18Q62280 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ss18Q62280 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ss18Q62280 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ss18Q62280 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ss18Q62280 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ss18Q62280 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
Ss18Q62280 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.33■□□□□ 0.37
Ss18Q62280 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ss18Q62280 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ss18Q62280 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ss18Q62280 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ss18Q62280 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ss18Q62280 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ss18Q62280 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ss18Q62280 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ss18Q62280 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ss18Q62280 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ss18Q62280 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.3■□□□□ 0.36
Ss18Q62280 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ss18Q62280 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ss18Q62280 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ss18Q62280 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ss18Q62280 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Ss18Q62280 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ss18Q62280 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Ss18Q62280 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ss18Q62280 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Ss18Q62280 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ss18Q62280 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ss18Q62280 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ss18Q62280 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ss18Q62280 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ss18Q62280 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ss18Q62280 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.26■□□□□ 0.35
Ss18Q62280 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ss18Q62280 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ss18Q62280 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.26■□□□□ 0.35
Ss18Q62280 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ss18Q62280 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Ss18Q62280 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ss18Q62280 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ss18Q62280 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms