Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf9P20334 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf9P20334 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tnfrsf9P20334 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf9P20334 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tnfrsf9P20334 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.11■□□□□ 0.65
Tnfrsf9P20334 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.1■□□□□ 0.65
Tnfrsf9P20334 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Tnfrsf9P20334 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.09■□□□□ 0.65
Tnfrsf9P20334 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfrsf9P20334 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tnfrsf9P20334 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Tnfrsf9P20334 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tnfrsf9P20334 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfrsf9P20334 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf9P20334 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.07■□□□□ 0.64
Tnfrsf9P20334 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Tnfrsf9P20334 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.07■□□□□ 0.64
Tnfrsf9P20334 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfrsf9P20334 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf9P20334 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
Tnfrsf9P20334 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Tnfrsf9P20334 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.05■□□□□ 0.64
Tnfrsf9P20334 Gm6311-201ENSMUST00000073790 878 ntBASIC19.05■□□□□ 0.64
Tnfrsf9P20334 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf9P20334 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf9P20334 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf9P20334 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf9P20334 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf9P20334 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.04■□□□□ 0.64
Tnfrsf9P20334 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf9P20334 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.04■□□□□ 0.64
Tnfrsf9P20334 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.04■□□□□ 0.64
Tnfrsf9P20334 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf9P20334 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.03■□□□□ 0.64
Tnfrsf9P20334 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Tnfrsf9P20334 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf9P20334 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf9P20334 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf9P20334 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.01■□□□□ 0.63
Tnfrsf9P20334 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.01■□□□□ 0.63
Tnfrsf9P20334 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tnfrsf9P20334 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tnfrsf9P20334 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf9P20334 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.99■□□□□ 0.63
Tnfrsf9P20334 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf9P20334 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf9P20334 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf9P20334 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf9P20334 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf9P20334 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf9P20334 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf9P20334 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf9P20334 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tnfrsf9P20334 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf9P20334 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf9P20334 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf9P20334 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.96■□□□□ 0.63
Tnfrsf9P20334 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf9P20334 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Tnfrsf9P20334 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Tnfrsf9P20334 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf9P20334 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf9P20334 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf9P20334 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.94■□□□□ 0.62
Tnfrsf9P20334 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.94■□□□□ 0.62
Tnfrsf9P20334 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf9P20334 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf9P20334 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf9P20334 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf9P20334 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf9P20334 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf9P20334 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfrsf9P20334 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.92■□□□□ 0.62
Tnfrsf9P20334 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.92■□□□□ 0.62
Tnfrsf9P20334 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Tnfrsf9P20334 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Tnfrsf9P20334 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.91■□□□□ 0.62
Tnfrsf9P20334 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf9P20334 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfrsf9P20334 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf9P20334 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf9P20334 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.9■□□□□ 0.62
Tnfrsf9P20334 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.9■□□□□ 0.62
Tnfrsf9P20334 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfrsf9P20334 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.89■□□□□ 0.62
Tnfrsf9P20334 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tnfrsf9P20334 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf9P20334 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf9P20334 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf9P20334 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf9P20334 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfrsf9P20334 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf9P20334 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf9P20334 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.88■□□□□ 0.61
Tnfrsf9P20334 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfrsf9P20334 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
Tnfrsf9P20334 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf9P20334 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfrsf9P20334 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms