Protein–RNA interactions for Protein: P01798

Ig heavy chain V-III region E109, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01798 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01798 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
P01798 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
P01798 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
P01798 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.27■□□□□ 0.84
P01798 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
P01798 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
P01798 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P01798 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01798 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P01798 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P01798 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P01798 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P01798 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.24■□□□□ 0.83
P01798 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.23■□□□□ 0.83
P01798 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P01798 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P01798 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
P01798 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01798 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
P01798 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01798 Gm8503-201ENSMUST00000118131 455 ntBASIC20.21■□□□□ 0.83
P01798 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01798 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01798 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01798 Gm6821-201ENSMUST00000107540 542 ntBASIC20.19■□□□□ 0.82
P01798 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
P01798 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.19■□□□□ 0.82
P01798 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01798 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.18■□□□□ 0.82
P01798 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01798 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01798 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01798 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01798 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01798 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.17■□□□□ 0.82
P01798 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01798 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01798 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01798 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01798 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
P01798 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
P01798 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P01798 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.14■□□□□ 0.81
P01798 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01798 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P01798 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01798 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P01798 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01798 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
P01798 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01798 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
P01798 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.12■□□□□ 0.81
P01798 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01798 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01798 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
P01798 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.11■□□□□ 0.81
P01798 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
P01798 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.1■□□□□ 0.81
P01798 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.1■□□□□ 0.81
P01798 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01798 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
P01798 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.09■□□□□ 0.81
P01798 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01798 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01798 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.07■□□□□ 0.8
P01798 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01798 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
P01798 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
P01798 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01798 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.05■□□□□ 0.8
P01798 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.05■□□□□ 0.8
P01798 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
P01798 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01798 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P01798 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
P01798 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01798 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01798 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01798 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01798 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
P01798 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01798 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P01798 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01798 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
P01798 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01798 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.02■□□□□ 0.8
P01798 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
P01798 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
P01798 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P01798 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
P01798 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P01798 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
P01798 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
P01798 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
P01798 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01798 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.01■□□□□ 0.79
P01798 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.01■□□□□ 0.79
P01798 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P01798 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms