Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp27D3YV89 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp27D3YV89 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Mmp27D3YV89 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp27D3YV89 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp27D3YV89 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mmp27D3YV89 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp27D3YV89 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp27D3YV89 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Mmp27D3YV89 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Mmp27D3YV89 Gm45855-201ENSMUST00000212546 880 ntBASIC19.85■□□□□ 0.77
Mmp27D3YV89 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Mmp27D3YV89 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Mmp27D3YV89 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp27D3YV89 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp27D3YV89 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Mmp27D3YV89 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp27D3YV89 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.84■□□□□ 0.77
Mmp27D3YV89 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.84■□□□□ 0.77
Mmp27D3YV89 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp27D3YV89 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp27D3YV89 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mmp27D3YV89 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp27D3YV89 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp27D3YV89 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Mmp27D3YV89 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp27D3YV89 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp27D3YV89 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp27D3YV89 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mmp27D3YV89 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Mmp27D3YV89 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mmp27D3YV89 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp27D3YV89 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp27D3YV89 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp27D3YV89 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp27D3YV89 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp27D3YV89 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Mmp27D3YV89 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.79■□□□□ 0.76
Mmp27D3YV89 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp27D3YV89 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp27D3YV89 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mmp27D3YV89 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp27D3YV89 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp27D3YV89 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.78■□□□□ 0.76
Mmp27D3YV89 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp27D3YV89 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp27D3YV89 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp27D3YV89 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp27D3YV89 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp27D3YV89 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mmp27D3YV89 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.77■□□□□ 0.76
Mmp27D3YV89 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp27D3YV89 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp27D3YV89 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp27D3YV89 Gm9397-201ENSMUST00000200125 605 ntBASIC19.76■□□□□ 0.75
Mmp27D3YV89 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.76■□□□□ 0.75
Mmp27D3YV89 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.75■□□□□ 0.75
Mmp27D3YV89 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Mmp27D3YV89 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.75■□□□□ 0.75
Mmp27D3YV89 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp27D3YV89 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp27D3YV89 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp27D3YV89 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Mmp27D3YV89 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp27D3YV89 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Mmp27D3YV89 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp27D3YV89 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp27D3YV89 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp27D3YV89 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp27D3YV89 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.73■□□□□ 0.75
Mmp27D3YV89 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp27D3YV89 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Mmp27D3YV89 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Mmp27D3YV89 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp27D3YV89 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp27D3YV89 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp27D3YV89 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp27D3YV89 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp27D3YV89 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp27D3YV89 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Mmp27D3YV89 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp27D3YV89 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.71■□□□□ 0.75
Mmp27D3YV89 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp27D3YV89 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Mmp27D3YV89 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp27D3YV89 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Mmp27D3YV89 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp27D3YV89 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp27D3YV89 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp27D3YV89 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.7■□□□□ 0.74
Mmp27D3YV89 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.7■□□□□ 0.74
Mmp27D3YV89 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp27D3YV89 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Mmp27D3YV89 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp27D3YV89 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp27D3YV89 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.69■□□□□ 0.74
Mmp27D3YV89 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp27D3YV89 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.69■□□□□ 0.74
Mmp27D3YV89 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Mmp27D3YV89 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms