Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Gm3880A0A1B0GSB3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC12□□□□□ -0.49
Gm3880A0A1B0GSB3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3880A0A1B0GSB3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3880A0A1B0GSB3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3880A0A1B0GSB3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Gm3880A0A1B0GSB3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3880A0A1B0GSB3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm3880A0A1B0GSB3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm3880A0A1B0GSB3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Gm3880A0A1B0GSB3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm3880A0A1B0GSB3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm3880A0A1B0GSB3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Gm3880A0A1B0GSB3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Gm3880A0A1B0GSB3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm3880A0A1B0GSB3 Gm17641-201ENSMUST00000166328 2350 ntBASIC11.99□□□□□ -0.49
Gm3880A0A1B0GSB3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm3880A0A1B0GSB3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC11.99□□□□□ -0.49
Gm3880A0A1B0GSB3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm3880A0A1B0GSB3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC11.98□□□□□ -0.49
Gm3880A0A1B0GSB3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Gm3880A0A1B0GSB3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm3880A0A1B0GSB3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Gm3880A0A1B0GSB3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm3880A0A1B0GSB3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Gm3880A0A1B0GSB3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Gm3880A0A1B0GSB3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm3880A0A1B0GSB3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm3880A0A1B0GSB3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm3880A0A1B0GSB3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm3880A0A1B0GSB3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm3880A0A1B0GSB3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm3880A0A1B0GSB3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Gm3880A0A1B0GSB3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm3880A0A1B0GSB3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC11.96□□□□□ -0.5
Gm3880A0A1B0GSB3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Gm3880A0A1B0GSB3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC11.95□□□□□ -0.5
Gm3880A0A1B0GSB3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3880A0A1B0GSB3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3880A0A1B0GSB3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3880A0A1B0GSB3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Gm3880A0A1B0GSB3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gm3880A0A1B0GSB3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3880A0A1B0GSB3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm3880A0A1B0GSB3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3880A0A1B0GSB3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3880A0A1B0GSB3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3880A0A1B0GSB3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3880A0A1B0GSB3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3880A0A1B0GSB3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Gm3880A0A1B0GSB3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm3880A0A1B0GSB3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Gm3880A0A1B0GSB3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3880A0A1B0GSB3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3880A0A1B0GSB3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gm3880A0A1B0GSB3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3880A0A1B0GSB3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3880A0A1B0GSB3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm3880A0A1B0GSB3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Gm3880A0A1B0GSB3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3880A0A1B0GSB3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3880A0A1B0GSB3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Gm3880A0A1B0GSB3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3880A0A1B0GSB3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3880A0A1B0GSB3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC11.9□□□□□ -0.5
Gm3880A0A1B0GSB3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm3880A0A1B0GSB3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Gm3880A0A1B0GSB3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Gm3880A0A1B0GSB3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC11.9□□□□□ -0.5
Gm3880A0A1B0GSB3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Gm3880A0A1B0GSB3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Gm3880A0A1B0GSB3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm3880A0A1B0GSB3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm3880A0A1B0GSB3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm3880A0A1B0GSB3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm3880A0A1B0GSB3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC11.89□□□□□ -0.51
Gm3880A0A1B0GSB3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm3880A0A1B0GSB3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Gm3880A0A1B0GSB3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm3880A0A1B0GSB3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm3880A0A1B0GSB3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm3880A0A1B0GSB3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Gm3880A0A1B0GSB3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm3880A0A1B0GSB3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm3880A0A1B0GSB3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm3880A0A1B0GSB3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm3880A0A1B0GSB3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Gm3880A0A1B0GSB3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3880A0A1B0GSB3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3880A0A1B0GSB3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3880A0A1B0GSB3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3880A0A1B0GSB3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3880A0A1B0GSB3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3880A0A1B0GSB3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm3880A0A1B0GSB3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm3880A0A1B0GSB3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3880A0A1B0GSB3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3880A0A1B0GSB3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3880A0A1B0GSB3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm3880A0A1B0GSB3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms