Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm13772-201ENSMUST00000118431 317 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Gm15068-201ENSMUST00000119796 192 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Gm11785-201ENSMUST00000120165 601 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Gm25621-201ENSMUST00000157223 114 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Gm22883-201ENSMUST00000157376 106 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Gm23752-201ENSMUST00000157584 115 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Gm20438-201ENSMUST00000174441 329 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Gm22852-201ENSMUST00000177899 101 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Gm28967-201ENSMUST00000187351 281 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Gm28872-201ENSMUST00000191518 158 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Gm8288-201ENSMUST00000223406 593 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh5Q9QUM7 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 CT025538.3-201ENSMUST00000225279 3848 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Gm12723-201ENSMUST00000120700 451 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Gm22650-201ENSMUST00000175138 105 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Mir6921-201ENSMUST00000183719 80 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Gm18444-201ENSMUST00000191239 629 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Gm44583-201ENSMUST00000207478 281 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Gm21032-201ENSMUST00000208108 2578 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Msh5Q9QUM7 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm15268-201ENSMUST00000118845 352 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm24839-201ENSMUST00000122602 107 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm25826-201ENSMUST00000157090 137 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm26106-201ENSMUST00000157254 228 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm23995-201ENSMUST00000158060 129 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm22729-201ENSMUST00000158088 129 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm24767-201ENSMUST00000158509 95 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm22655-201ENSMUST00000174949 96 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm21991-201ENSMUST00000180006 508 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Mir6244-201ENSMUST00000184156 117 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Mir3969-201ENSMUST00000197106 92 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm7166-201ENSMUST00000199715 303 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm5735-201ENSMUST00000207053 167 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm25651-201ENSMUST00000083782 119 ntBASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC5.79□□□□□ -1.48
Msh5Q9QUM7 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Msh5Q9QUM7 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Msh5Q9QUM7 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.78□□□□□ -1.48
Msh5Q9QUM7 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.78□□□□□ -1.48
Msh5Q9QUM7 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msh5Q9QUM7 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msh5Q9QUM7 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Msh5Q9QUM7 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms