Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RpainQ9CWY9 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RpainQ9CWY9 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm5757-201ENSMUST00000117494 528 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm24774-201ENSMUST00000157384 134 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm26028-201ENSMUST00000158660 294 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm5372-201ENSMUST00000187540 409 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm3145-201ENSMUST00000188584 220 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm18964-201ENSMUST00000193013 563 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm44474-201ENSMUST00000196525 127 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm43975-201ENSMUST00000203023 481 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm44475-201ENSMUST00000204041 424 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RpainQ9CWY9 AC164161.1-201ENSMUST00000214076 639 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm5955-201ENSMUST00000222712 219 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm22293-201ENSMUST00000083314 109 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm25937-201ENSMUST00000083912 107 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.53□□□□□ -1.68
RpainQ9CWY9 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.53□□□□□ -1.68
RpainQ9CWY9 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
RpainQ9CWY9 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RpainQ9CWY9 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RpainQ9CWY9 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RpainQ9CWY9 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.53□□□□□ -1.69
RpainQ9CWY9 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
RpainQ9CWY9 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RpainQ9CWY9 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm24889-201ENSMUST00000104388 132 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm14688-201ENSMUST00000119169 303 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm14915-201ENSMUST00000120747 204 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm11229-201ENSMUST00000121993 437 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm15147-201ENSMUST00000122263 483 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC4.52□□□□□ -1.69
RpainQ9CWY9 Mir3112-201ENSMUST00000175431 82 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm25939-201ENSMUST00000179876 191 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm27611-201ENSMUST00000184690 108 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm8600-201ENSMUST00000186320 905 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm28920-201ENSMUST00000189957 699 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm17954-201ENSMUST00000195893 607 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm45616-201ENSMUST00000211711 319 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm45710-201ENSMUST00000212847 215 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.52□□□□□ -1.69
RpainQ9CWY9 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Gm26447-201ENSMUST00000082448 129 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RpainQ9CWY9 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RpainQ9CWY9 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RpainQ9CWY9 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.52□□□□□ -1.69
RpainQ9CWY9 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm13378-201ENSMUST00000117483 336 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm15553-201ENSMUST00000118757 430 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm15211-201ENSMUST00000118932 528 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm11830-201ENSMUST00000120175 561 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Mir3964-201ENSMUST00000174898 74 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Mir5099-201ENSMUST00000175257 74 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm22448-201ENSMUST00000179254 107 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm19193-201ENSMUST00000190263 590 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm38044-201ENSMUST00000192964 487 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm38098-201ENSMUST00000194115 241 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RpainQ9CWY9 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm46389-201ENSMUST00000223199 392 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RpainQ9CWY9 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm23412-201ENSMUST00000083017 107 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.51□□□□□ -1.69
RpainQ9CWY9 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RpainQ9CWY9 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RpainQ9CWY9 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RpainQ9CWY9 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms