Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm44016-201ENSMUST00000203463 164 ntBASIC5.22□□□□□ -1.57
Trim11Q99PQ2 Gm45859-201ENSMUST00000212794 214 ntBASIC5.22□□□□□ -1.57
Trim11Q99PQ2 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.22□□□□□ -1.57
Trim11Q99PQ2 Gm18442-201ENSMUST00000220925 639 ntBASIC5.22□□□□□ -1.57
Trim11Q99PQ2 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim11Q99PQ2 Gm8074-201ENSMUST00000095071 252 ntBASIC5.22□□□□□ -1.57
Trim11Q99PQ2 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.22□□□□□ -1.57
Trim11Q99PQ2 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.22□□□□□ -1.57
Trim11Q99PQ2 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.22□□□□□ -1.57
Trim11Q99PQ2 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim11Q99PQ2 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim11Q99PQ2 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Trim11Q99PQ2 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Trim11Q99PQ2 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.21□□□□□ -1.57
Trim11Q99PQ2 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Trim11Q99PQ2 Gm37642-201ENSMUST00000193166 1735 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm24867-201ENSMUST00000104161 107 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Mir881-201ENSMUST00000104844 78 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm12760-201ENSMUST00000117861 482 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm14940-201ENSMUST00000119309 495 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm13430-201ENSMUST00000121366 288 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm24217-201ENSMUST00000158260 133 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm24636-201ENSMUST00000158673 288 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm27997-201ENSMUST00000184942 69 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm37070-201ENSMUST00000193272 460 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm43828-201ENSMUST00000196890 639 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.21□□□□□ -1.58
Trim11Q99PQ2 AC130222.1-201ENSMUST00000221198 256 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm10916-201ENSMUST00000080330 483 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm22220-201ENSMUST00000082671 149 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm25207-201ENSMUST00000093745 107 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim11Q99PQ2 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim11Q99PQ2 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm14500-201ENSMUST00000121647 113 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm7840-201ENSMUST00000122086 533 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm24507-201ENSMUST00000157683 134 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm16114-201ENSMUST00000161930 300 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm5258-201ENSMUST00000165437 327 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm28921-201ENSMUST00000190219 378 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm44474-201ENSMUST00000196525 127 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm6059-201ENSMUST00000196903 340 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm43309-201ENSMUST00000200837 458 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm44054-201ENSMUST00000203814 372 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm29884-201ENSMUST00000218403 453 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Mir17-201ENSMUST00000083574 84 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Gm8744-201ENSMUST00000204475 3581 ntBASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim11Q99PQ2 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim11Q99PQ2 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim11Q99PQ2 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm14469-201ENSMUST00000118363 202 ntBASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm14627-201ENSMUST00000118931 567 ntBASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm14101-201ENSMUST00000121502 473 ntBASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm24188-201ENSMUST00000157980 108 ntBASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm23892-201ENSMUST00000158105 130 ntBASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm22389-201ENSMUST00000158193 301 ntBASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm27457-201ENSMUST00000184771 156 ntBASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm29668-201ENSMUST00000187802 315 ntBASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm28860-201ENSMUST00000188103 313 ntBASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm28830-201ENSMUST00000188192 213 ntBASIC5.19□□□□□ -1.58
Trim11Q99PQ2 Gm38080-201ENSMUST00000194035 268 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms