Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 AC163646.2-201ENSMUST00000227962 141 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm25079-201ENSMUST00000082529 203 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Mir181a-1-201ENSMUST00000083631 87 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc9Q8VC31 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 Gm11943-201ENSMUST00000119473 327 ntBASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 Gm4854-201ENSMUST00000185902 574 ntBASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 Gm28579-201ENSMUST00000186143 369 ntBASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 Gm2829-201ENSMUST00000213121 499 ntBASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 AC155314.1-201ENSMUST00000227624 508 ntBASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc9Q8VC31 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Ccdc9Q8VC31 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Ccdc9Q8VC31 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm42483-201ENSMUST00000197556 1742 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 AC167192.3-201ENSMUST00000224096 1567 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm24430-201ENSMUST00000104077 104 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm26156-201ENSMUST00000116999 123 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm11386-201ENSMUST00000117761 347 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm14785-201ENSMUST00000120185 539 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm8121-201ENSMUST00000153583 499 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm22516-201ENSMUST00000158266 124 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm25438-201ENSMUST00000158281 110 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm22766-201ENSMUST00000158372 99 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Cfap61-214ENSMUST00000167179 183 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm18486-201ENSMUST00000184040 298 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm28843-201ENSMUST00000189198 678 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm29546-201ENSMUST00000191171 678 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm42465-201ENSMUST00000197036 492 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm44409-201ENSMUST00000198810 166 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm3189-201ENSMUST00000205595 832 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm45189-201ENSMUST00000208567 363 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm7751-201ENSMUST00000212868 709 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Mir346-201ENSMUST00000083547 98 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Mir34b-201ENSMUST00000083558 84 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm22829-201ENSMUST00000083771 106 ntBASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc9Q8VC31 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Mir761-201ENSMUST00000103245 76 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm23319-201ENSMUST00000104467 131 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm11372-201ENSMUST00000117348 570 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm13672-201ENSMUST00000117554 459 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm13692-201ENSMUST00000120774 371 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm14919-201ENSMUST00000120839 390 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm7618-201ENSMUST00000121643 171 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm22733-201ENSMUST00000158094 91 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm22637-201ENSMUST00000158144 283 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm24315-201ENSMUST00000177835 127 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm22252-201ENSMUST00000179316 79 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Mir6996-201ENSMUST00000183922 61 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm8823-201ENSMUST00000193158 433 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm37417-201ENSMUST00000195257 454 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Mir3073b-201ENSMUST00000199383 60 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm35931-201ENSMUST00000203931 448 ntBASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc9Q8VC31 AC134334.1-201ENSMUST00000214277 255 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 131.4 ms