Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm24859-201ENSMUST00000082729 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm23057-201ENSMUST00000082801 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm26328-201ENSMUST00000082821 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm26331-201ENSMUST00000082824 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm24205-201ENSMUST00000082953 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm25405-201ENSMUST00000082973 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm26324-201ENSMUST00000083073 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm26496-201ENSMUST00000083150 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm26127-201ENSMUST00000083193 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm24456-201ENSMUST00000083198 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm24458-201ENSMUST00000083204 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm24018-201ENSMUST00000083232 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm25987-201ENSMUST00000083234 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm25794-201ENSMUST00000083286 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm25790-201ENSMUST00000083293 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm22295-201ENSMUST00000083311 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm25127-201ENSMUST00000083336 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm25583-201ENSMUST00000083413 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm25577-201ENSMUST00000083414 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm24414-201ENSMUST00000083434 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm24861-201ENSMUST00000083459 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Mir181b-2-201ENSMUST00000083644 89 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm24803-201ENSMUST00000083693 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm23103-201ENSMUST00000083725 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm22580-201ENSMUST00000083727 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm24260-201ENSMUST00000083741 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm23732-201ENSMUST00000083751 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm22682-201ENSMUST00000083854 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm25869-201ENSMUST00000083855 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm24693-201ENSMUST00000083885 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm26317-201ENSMUST00000083894 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm24448-201ENSMUST00000083979 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm22798-201ENSMUST00000083992 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm26427-201ENSMUST00000093648 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm22886-201ENSMUST00000093714 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm22170-201ENSMUST00000097247 107 ntBASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim47Q8C0E3 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Gm23000-201ENSMUST00000157083 139 ntBASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Gm24968-201ENSMUST00000179817 107 ntBASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Gm9687-201ENSMUST00000189312 602 ntBASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Gm44402-201ENSMUST00000203677 238 ntBASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Gm34224-201ENSMUST00000204606 364 ntBASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim47Q8C0E3 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim47Q8C0E3 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm15896-201ENSMUST00000118045 440 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm13149-201ENSMUST00000122071 339 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm23115-201ENSMUST00000158480 108 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm3370-201ENSMUST00000171785 500 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm42526-201ENSMUST00000198956 393 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm43600-201ENSMUST00000202134 223 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm46190-201ENSMUST00000219650 427 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 AC124562.1-201ENSMUST00000224673 337 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm25078-201ENSMUST00000082530 107 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Snora52-201ENSMUST00000082732 137 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm23741-201ENSMUST00000097237 171 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim47Q8C0E3 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim47Q8C0E3 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Trim47Q8C0E3 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms