Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm25892-201ENSMUST00000179867 121 ntBASIC6.24□□□□□ -1.41
Trim35Q8C006 Gm24092-201ENSMUST00000180257 121 ntBASIC6.24□□□□□ -1.41
Trim35Q8C006 Gm4322-201ENSMUST00000191094 336 ntBASIC6.24□□□□□ -1.41
Trim35Q8C006 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim35Q8C006 AC131178.1-201ENSMUST00000228649 492 ntBASIC6.24□□□□□ -1.41
Trim35Q8C006 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim35Q8C006 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim35Q8C006 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim35Q8C006 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim35Q8C006 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim35Q8C006 Gm42862-201ENSMUST00000197494 2621 ntBASIC6.24□□□□□ -1.41
Trim35Q8C006 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.24□□□□□ -1.41
Trim35Q8C006 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim35Q8C006 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.24□□□□□ -1.41
Trim35Q8C006 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
Trim35Q8C006 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim35Q8C006 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Trim35Q8C006 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim35Q8C006 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim35Q8C006 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim35Q8C006 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim35Q8C006 Mir19b-1-201ENSMUST00000102301 87 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm23655-201ENSMUST00000122627 105 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm25057-201ENSMUST00000157366 88 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm23223-201ENSMUST00000158119 127 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm16269-201ENSMUST00000160532 409 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm42799-201ENSMUST00000201331 328 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm44976-201ENSMUST00000205543 261 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm45249-201ENSMUST00000211021 348 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm46138-201ENSMUST00000215294 426 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.23□□□□□ -1.41
Trim35Q8C006 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm24625-201ENSMUST00000082622 130 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim35Q8C006 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim35Q8C006 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim35Q8C006 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim35Q8C006 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm15303-201ENSMUST00000118676 2624 ntBASIC6.23□□□□□ -1.41
Trim35Q8C006 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.23□□□□□ -1.41
Trim35Q8C006 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim35Q8C006 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim35Q8C006 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim35Q8C006 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Trim35Q8C006 AC154227.1-201ENSMUST00000228809 2467 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim35Q8C006 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim35Q8C006 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm24280-201ENSMUST00000104237 134 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim35Q8C006 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm23230-201ENSMUST00000157298 133 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm23586-201ENSMUST00000157657 123 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm22326-201ENSMUST00000158897 351 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Mir6244-201ENSMUST00000184156 117 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm2602-201ENSMUST00000202112 571 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm42960-201ENSMUST00000202160 241 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm45448-201ENSMUST00000211739 209 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm10095-201ENSMUST00000222765 483 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm25589-201ENSMUST00000082502 166 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm22684-201ENSMUST00000082849 132 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Gm22581-201ENSMUST00000083735 136 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim35Q8C006 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim35Q8C006 AC158921.1-201ENSMUST00000227861 3468 ntBASIC6.22□□□□□ -1.41
Trim35Q8C006 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim35Q8C006 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim35Q8C006 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim35Q8C006 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Trim35Q8C006 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Trim35Q8C006 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.21□□□□□ -1.41
Trim35Q8C006 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.21□□□□□ -1.41
Trim35Q8C006 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Trim35Q8C006 Gm7470-201ENSMUST00000194219 2095 ntBASIC6.21□□□□□ -1.41
Trim35Q8C006 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim35Q8C006 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.21□□□□□ -1.42
Trim35Q8C006 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim35Q8C006 Gm23599-201ENSMUST00000157261 251 ntBASIC6.21□□□□□ -1.42
Trim35Q8C006 Gm23343-201ENSMUST00000158964 143 ntBASIC6.21□□□□□ -1.42
Trim35Q8C006 Mir5107-201ENSMUST00000175586 88 ntBASIC6.21□□□□□ -1.42
Trim35Q8C006 Mir6367-201ENSMUST00000183385 102 ntBASIC6.21□□□□□ -1.42
Trim35Q8C006 Gm37177-201ENSMUST00000193768 417 ntBASIC6.21□□□□□ -1.42
Trim35Q8C006 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim35Q8C006 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim35Q8C006 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.21□□□□□ -1.42
Trim35Q8C006 AC134860.6-201ENSMUST00000226038 285 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms