Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Gm37801-201ENSMUST00000194754 274 ntBASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Gm20056-201ENSMUST00000194813 519 ntBASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Mir5121-201ENSMUST00000198528 74 ntBASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Gm44879-201ENSMUST00000207007 503 ntBASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Gm44825-201ENSMUST00000207557 150 ntBASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Gm44598-201ENSMUST00000207566 150 ntBASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Gm5045-201ENSMUST00000027054 810 ntBASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Gm24045-201ENSMUST00000083113 98 ntBASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Gm24410-201ENSMUST00000083433 107 ntBASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Sh3rf1Q69ZI1 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm11633-201ENSMUST00000118176 444 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm13876-201ENSMUST00000118451 261 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm12721-201ENSMUST00000120621 268 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm12956-201ENSMUST00000122184 414 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm5558-201ENSMUST00000178933 495 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm27875-201ENSMUST00000184425 123 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm19126-201ENSMUST00000207896 509 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm19096-201ENSMUST00000209705 766 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 AC123860.1-201ENSMUST00000228033 481 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Sh3rf1Q69ZI1 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm23142-201ENSMUST00000101848 105 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm26240-201ENSMUST00000101893 105 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm2066-201ENSMUST00000118046 389 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm12647-201ENSMUST00000118977 265 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm13692-201ENSMUST00000120774 371 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm22814-201ENSMUST00000157452 104 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm25605-201ENSMUST00000158364 124 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm5258-201ENSMUST00000165437 327 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm17020-201ENSMUST00000172274 274 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm5777-201ENSMUST00000177265 448 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm26585-201ENSMUST00000180890 630 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Mir6418-201ENSMUST00000185075 115 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm28872-201ENSMUST00000191518 158 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm36954-201ENSMUST00000195362 363 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm43309-201ENSMUST00000200837 458 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr1285-201ENSMUST00000208523 903 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 AC163357.1-201ENSMUST00000220847 233 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm18921-201ENSMUST00000221798 366 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sh3rf1Q69ZI1 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms