Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm24281-201ENSMUST00000104234 136 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm14125-201ENSMUST00000113442 680 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm14558-201ENSMUST00000117458 381 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm11363-201ENSMUST00000121672 548 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm23123-201ENSMUST00000157648 144 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm24727-201ENSMUST00000158231 144 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm23112-201ENSMUST00000158606 125 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm2092-201ENSMUST00000178887 639 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm2759-201ENSMUST00000179938 639 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm24306-201ENSMUST00000180229 79 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm26556-201ENSMUST00000180645 320 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm28058-201ENSMUST00000186421 264 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm28666-201ENSMUST00000186649 274 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm37586-201ENSMUST00000193654 204 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm43510-201ENSMUST00000197922 353 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm44055-201ENSMUST00000204376 247 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm44060-201ENSMUST00000204440 410 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm29754-201ENSMUST00000206269 358 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm45590-201ENSMUST00000209715 262 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm8423-201ENSMUST00000211387 607 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm5358-201ENSMUST00000212814 353 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm4036-201ENSMUST00000220842 626 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Snord21-201ENSMUST00000082519 94 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm24037-201ENSMUST00000082871 180 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm26206-201ENSMUST00000082908 110 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Mir30e-201ENSMUST00000083475 92 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col28a1Q2UY11 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Mir690-201ENSMUST00000102110 109 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm23319-201ENSMUST00000104467 131 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm15151-201ENSMUST00000117106 177 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm12543-201ENSMUST00000120410 543 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm13852-201ENSMUST00000122350 242 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm24836-201ENSMUST00000122609 108 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm25808-201ENSMUST00000122784 284 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm22216-201ENSMUST00000157557 114 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm22675-201ENSMUST00000158430 104 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm26005-201ENSMUST00000158802 134 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm2862-201ENSMUST00000161524 328 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm3030-201ENSMUST00000163410 516 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm22398-201ENSMUST00000174941 125 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm25731-201ENSMUST00000175167 125 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm25412-201ENSMUST00000180258 107 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm27445-201ENSMUST00000184484 72 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm29134-201ENSMUST00000186579 126 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm28241-201ENSMUST00000190916 235 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm36984-201ENSMUST00000192770 235 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm44472-201ENSMUST00000204922 943 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm35262-201ENSMUST00000215133 267 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm29774-201ENSMUST00000219270 436 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.68□□□□□ -1.82
Col28a1Q2UY11 AC166358.10-201ENSMUST00000220556 144 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.68□□□□□ -1.82
Col28a1Q2UY11 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms