Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm44300-201ENSMUST00000196792 121 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm42438-201ENSMUST00000197832 974 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm17937-201ENSMUST00000197908 742 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Mir378a-201ENSMUST00000198300 66 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm44548-201ENSMUST00000208929 192 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm18346-201ENSMUST00000216782 325 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Platr25-208ENSMUST00000222602 939 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm25485-201ENSMUST00000104120 132 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Nkx3-1P97436 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm15147-201ENSMUST00000122263 483 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm7209-201ENSMUST00000122339 333 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.2□□□□□ -2.06
Nkx3-1P97436 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm16147-201ENSMUST00000162143 373 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm17065-201ENSMUST00000165245 239 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm27715-201ENSMUST00000184714 260 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm28788-201ENSMUST00000189717 375 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm29558-201ENSMUST00000190134 375 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm5731-201ENSMUST00000190969 481 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm37523-201ENSMUST00000194901 412 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm6590-201ENSMUST00000203343 687 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm7753-201ENSMUST00000221007 867 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 AC158392.1-201ENSMUST00000223720 1069 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Nkx3-1P97436 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm23264-201ENSMUST00000083372 107 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Nkx3-1P97436 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Nkx3-1P97436 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.2□□□□□ -2.06
Nkx3-1P97436 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Nkx3-1P97436 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm22486-201ENSMUST00000116815 137 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm11356-201ENSMUST00000118974 192 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm13359-201ENSMUST00000119000 695 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm14591-201ENSMUST00000120407 518 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm26411-201ENSMUST00000157668 107 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm15974-201ENSMUST00000159103 531 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm27220-201ENSMUST00000183453 262 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm44060-201ENSMUST00000204440 410 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm6012-201ENSMUST00000210821 730 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm45742-201ENSMUST00000212400 433 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Nkx3-1P97436 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm5374-201ENSMUST00000222868 657 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm23975-201ENSMUST00000082685 106 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Gm22829-201ENSMUST00000083771 106 ntBASIC2.19□□□□□ -2.06
Nkx3-1P97436 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Nkx3-1P97436 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Nkx3-1P97436 Mir542-201ENSMUST00000102186 85 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm11285-201ENSMUST00000118443 322 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm14627-201ENSMUST00000118931 567 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm14159-201ENSMUST00000119832 451 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm11819-201ENSMUST00000122192 372 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm25047-201ENSMUST00000122667 104 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm22227-201ENSMUST00000157356 259 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Gm25866-201ENSMUST00000158245 112 ntBASIC2.18□□□□□ -2.06
Nkx3-1P97436 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Nkx3-1P97436 Adgrg4-206ENSMUST00000168724 531 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms