Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Col1a1P11087 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col1a1P11087 Gm25099-201ENSMUST00000093716 116 ntBASIC2.36□□□□□ -2.03
Col1a1P11087 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col1a1P11087 Gm15399-201ENSMUST00000118055 724 ntBASIC2.35□□□□□ -2.03
Col1a1P11087 Gm12294-201ENSMUST00000119723 490 ntBASIC2.35□□□□□ -2.03
Col1a1P11087 Gm11430-201ENSMUST00000121317 217 ntBASIC2.35□□□□□ -2.03
Col1a1P11087 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC2.35□□□□□ -2.03
Col1a1P11087 Gm24857-201ENSMUST00000158061 310 ntBASIC2.35□□□□□ -2.03
Col1a1P11087 Gm27718-201ENSMUST00000183721 86 ntBASIC2.35□□□□□ -2.03
Col1a1P11087 Mir7678-201ENSMUST00000185076 71 ntBASIC2.35□□□□□ -2.03
Col1a1P11087 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.35□□□□□ -2.03
Col1a1P11087 Gm44609-201ENSMUST00000207157 460 ntBASIC2.35□□□□□ -2.03
Col1a1P11087 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.35□□□□□ -2.03
Col1a1P11087 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.35□□□□□ -2.03
Col1a1P11087 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.35□□□□□ -2.03
Col1a1P11087 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col1a1P11087 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col1a1P11087 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col1a1P11087 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Col1a1P11087 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Col1a1P11087 Gm24889-201ENSMUST00000104388 132 ntBASIC2.34□□□□□ -2.03
Col1a1P11087 Gm14793-201ENSMUST00000118739 311 ntBASIC2.34□□□□□ -2.03
Col1a1P11087 Gm25069-201ENSMUST00000175238 86 ntBASIC2.34□□□□□ -2.03
Col1a1P11087 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.34□□□□□ -2.03
Col1a1P11087 Gm24757-201ENSMUST00000176987 371 ntBASIC2.34□□□□□ -2.03
Col1a1P11087 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC2.34□□□□□ -2.03
Col1a1P11087 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.34□□□□□ -2.03
Col1a1P11087 Gm37290-201ENSMUST00000195775 339 ntBASIC2.34□□□□□ -2.03
Col1a1P11087 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Col1a1P11087 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.34□□□□□ -2.03
Col1a1P11087 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.34□□□□□ -2.03
Col1a1P11087 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.34□□□□□ -2.03
Col1a1P11087 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.34□□□□□ -2.03
Col1a1P11087 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.34□□□□□ -2.03
Col1a1P11087 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC2.34□□□□□ -2.03
Col1a1P11087 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col1a1P11087 Gm23256-201ENSMUST00000102235 110 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Col1a1P11087 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm14905-201ENSMUST00000122351 639 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col1a1P11087 Gm23229-201ENSMUST00000157297 105 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm27753-201ENSMUST00000184742 203 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm36954-201ENSMUST00000195362 363 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm44425-201ENSMUST00000203739 429 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm7407-201ENSMUST00000208301 568 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm22304-201ENSMUST00000082688 129 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm25124-201ENSMUST00000083345 164 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col1a1P11087 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col1a1P11087 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Col1a1P11087 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm25832-201ENSMUST00000104140 130 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm14602-201ENSMUST00000118625 340 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm11876-201ENSMUST00000120002 269 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm28155-201ENSMUST00000191066 151 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.33□□□□□ -2.04
Col1a1P11087 Gm4263-202ENSMUST00000221392 667 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Col1a1P11087 Gm6462-201ENSMUST00000081488 304 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm25813-201ENSMUST00000082748 191 ntBASIC2.33□□□□□ -2.04
Col1a1P11087 Gm24840-201ENSMUST00000122603 147 ntBASIC2.32□□□□□ -2.04
Col1a1P11087 Gm27733-201ENSMUST00000184803 68 ntBASIC2.32□□□□□ -2.04
Col1a1P11087 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC2.32□□□□□ -2.04
Col1a1P11087 Gm8249-201ENSMUST00000219225 465 ntBASIC2.32□□□□□ -2.04
Col1a1P11087 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.32□□□□□ -2.04
Col1a1P11087 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.32□□□□□ -2.04
Col1a1P11087 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col1a1P11087 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.32□□□□□ -2.04
Col1a1P11087 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.32□□□□□ -2.04
Col1a1P11087 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col1a1P11087 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col1a1P11087 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col1a1P11087 Gm26396-201ENSMUST00000104093 132 ntBASIC2.31□□□□□ -2.04
Col1a1P11087 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Col1a1P11087 Gm15159-201ENSMUST00000117062 764 ntBASIC2.31□□□□□ -2.04
Col1a1P11087 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Col1a1P11087 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Col1a1P11087 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col1a1P11087 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col1a1P11087 Gm27427-201ENSMUST00000185134 193 ntBASIC2.31□□□□□ -2.04
Col1a1P11087 Gm18448-201ENSMUST00000186286 599 ntBASIC2.31□□□□□ -2.04
Col1a1P11087 Gm38214-201ENSMUST00000192581 988 ntBASIC2.31□□□□□ -2.04
Col1a1P11087 Gm45367-201ENSMUST00000210171 347 ntBASIC2.31□□□□□ -2.04
Col1a1P11087 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.31□□□□□ -2.04
Col1a1P11087 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC2.31□□□□□ -2.04
Col1a1P11087 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC2.31□□□□□ -2.04
Col1a1P11087 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.31□□□□□ -2.04
Col1a1P11087 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.31□□□□□ -2.04
Col1a1P11087 Gm42671-201ENSMUST00000198013 1604 ntBASIC2.31□□□□□ -2.04
Col1a1P11087 Mir301b-201ENSMUST00000102333 97 ntBASIC2.3□□□□□ -2.04
Col1a1P11087 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col1a1P11087 Gm14880-201ENSMUST00000117581 292 ntBASIC2.3□□□□□ -2.04
Col1a1P11087 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC2.3□□□□□ -2.04
Col1a1P11087 Gm15900-201ENSMUST00000161584 342 ntBASIC2.3□□□□□ -2.04
Col1a1P11087 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms