Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm22817-201ENSMUST00000157448 356 ntBASIC2.23□□□□□ -2.05
Col5a1O88207 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.23□□□□□ -2.05
Col5a1O88207 Mir8103-201ENSMUST00000183945 107 ntBASIC2.23□□□□□ -2.05
Col5a1O88207 Gm27330-201ENSMUST00000184689 132 ntBASIC2.23□□□□□ -2.05
Col5a1O88207 Gm32175-201ENSMUST00000193641 346 ntBASIC2.23□□□□□ -2.05
Col5a1O88207 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col5a1O88207 Gm5175-202ENSMUST00000219699 529 ntBASIC2.23□□□□□ -2.05
Col5a1O88207 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC2.23□□□□□ -2.05
Col5a1O88207 AC153975.1-201ENSMUST00000220087 926 ntBASIC2.23□□□□□ -2.05
Col5a1O88207 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Col5a1O88207 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.23□□□□□ -2.05
Col5a1O88207 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Col5a1O88207 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Col5a1O88207 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Col5a1O88207 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Col5a1O88207 Gm25628-201ENSMUST00000084002 105 ntBASIC2.23□□□□□ -2.05
Col5a1O88207 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Col5a1O88207 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.22□□□□□ -2.05
Col5a1O88207 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col5a1O88207 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col5a1O88207 Mir758-201ENSMUST00000103260 81 ntBASIC2.22□□□□□ -2.05
Col5a1O88207 Gm14939-201ENSMUST00000120347 680 ntBASIC2.22□□□□□ -2.05
Col5a1O88207 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.22□□□□□ -2.05
Col5a1O88207 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC2.22□□□□□ -2.05
Col5a1O88207 Gm23714-201ENSMUST00000179259 105 ntBASIC2.22□□□□□ -2.05
Col5a1O88207 Gm27155-201ENSMUST00000183716 898 ntBASIC2.22□□□□□ -2.05
Col5a1O88207 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.22□□□□□ -2.05
Col5a1O88207 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC2.22□□□□□ -2.05
Col5a1O88207 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC2.22□□□□□ -2.05
Col5a1O88207 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Col5a1O88207 Gm37438-201ENSMUST00000192813 393 ntBASIC2.22□□□□□ -2.05
Col5a1O88207 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.22□□□□□ -2.05
Col5a1O88207 Gm42625-201ENSMUST00000198611 922 ntBASIC2.22□□□□□ -2.05
Col5a1O88207 Gm45395-201ENSMUST00000209891 559 ntBASIC2.22□□□□□ -2.05
Col5a1O88207 Gm17911-201ENSMUST00000210806 877 ntBASIC2.22□□□□□ -2.05
Col5a1O88207 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.22□□□□□ -2.05
Col5a1O88207 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.22□□□□□ -2.05
Col5a1O88207 Gm7214-201ENSMUST00000222428 272 ntBASIC2.22□□□□□ -2.05
Col5a1O88207 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col5a1O88207 Mir129-2-201ENSMUST00000083577 90 ntBASIC2.22□□□□□ -2.05
Col5a1O88207 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col5a1O88207 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col5a1O88207 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col5a1O88207 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Col5a1O88207 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Col5a1O88207 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col5a1O88207 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.22□□□□□ -2.05
Col5a1O88207 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC2.21□□□□□ -2.05
Col5a1O88207 Gm11876-201ENSMUST00000120002 269 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 Gm14977-201ENSMUST00000121626 812 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.21□□□□□ -2.05
Col5a1O88207 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
Col5a1O88207 Gm25971-201ENSMUST00000158953 286 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC2.21□□□□□ -2.05
Col5a1O88207 Gm24561-201ENSMUST00000175182 95 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 Mir7039-201ENSMUST00000183852 85 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 Gm9541-201ENSMUST00000188409 502 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 Gm28925-201ENSMUST00000188586 168 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 Gm44403-201ENSMUST00000198554 129 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 Gm45689-201ENSMUST00000210522 133 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 Gm36247-201ENSMUST00000211834 285 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.21□□□□□ -2.05
Col5a1O88207 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 AC129308.2-201ENSMUST00000224588 789 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 AC168880.1-201ENSMUST00000225113 707 ntBASIC2.21□□□□□ -2.05
Col5a1O88207 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col5a1O88207 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col5a1O88207 Gm3940-201ENSMUST00000105087 432 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 Gm13419-201ENSMUST00000121711 271 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 Gm24592-201ENSMUST00000122505 106 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Col5a1O88207 Gm23716-201ENSMUST00000157348 144 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 Gm22339-201ENSMUST00000157718 62 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC2.21□□□□□ -2.06
Col5a1O88207 Gm19280-201ENSMUST00000190191 205 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 Gm38154-201ENSMUST00000195444 340 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 Gm43722-201ENSMUST00000196054 124 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 Gm2142-201ENSMUST00000197899 589 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 Gm18540-201ENSMUST00000204025 526 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col5a1O88207 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.21□□□□□ -2.06
Col5a1O88207 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col5a1O88207 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col5a1O88207 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Col5a1O88207 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Col5a1O88207 Gm6030-201ENSMUST00000078768 402 ntBASIC2.21□□□□□ -2.06
Col5a1O88207 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.21□□□□□ -2.06
Col5a1O88207 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Col5a1O88207 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col5a1O88207 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.2□□□□□ -2.06
Col5a1O88207 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Col5a1O88207 Mup-ps21-201ENSMUST00000119998 448 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms