Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm26387-201ENSMUST00000104238 132 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm15988-201ENSMUST00000118677 367 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm14049-201ENSMUST00000121009 636 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm25105-201ENSMUST00000122477 130 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm22034-201ENSMUST00000157283 134 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm23666-201ENSMUST00000158053 116 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm20534-201ENSMUST00000172957 172 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm4076-201ENSMUST00000179230 965 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm21816-201ENSMUST00000179255 360 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm27028-201ENSMUST00000182303 399 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm27236-201ENSMUST00000184147 442 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm44343-201ENSMUST00000196702 90 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm44391-201ENSMUST00000198490 93 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm7946-201ENSMUST00000203326 958 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm19244-201ENSMUST00000204340 253 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm45387-201ENSMUST00000209792 632 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trav13d-3J3QMG8 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm25507-201ENSMUST00000116981 144 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm12268-201ENSMUST00000118398 442 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm12433-201ENSMUST00000119659 255 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm14766-201ENSMUST00000121689 367 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm12368-201ENSMUST00000122251 434 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm25667-201ENSMUST00000157701 275 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm22841-201ENSMUST00000158443 62 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm26195-201ENSMUST00000175035 101 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm24315-201ENSMUST00000177835 127 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm27163-201ENSMUST00000184767 409 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm28148-201ENSMUST00000186924 697 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm29107-201ENSMUST00000190910 347 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm37568-201ENSMUST00000191755 364 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm37757-201ENSMUST00000193072 210 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm43804-201ENSMUST00000198280 456 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm44128-201ENSMUST00000204909 219 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Snord38a-201ENSMUST00000083746 71 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.09□□□□□ -1.91
Trav13d-3J3QMG8 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Trav13d-3J3QMG8 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm12492-201ENSMUST00000117665 564 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm12722-201ENSMUST00000118507 493 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm15244-201ENSMUST00000121122 130 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm14810-201ENSMUST00000121628 486 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm22516-201ENSMUST00000158266 124 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm23775-201ENSMUST00000158991 249 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Mir3964-201ENSMUST00000174898 74 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Mir5129-201ENSMUST00000174938 78 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm26460-201ENSMUST00000175061 126 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm20612-201ENSMUST00000176318 236 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Mir5710-201ENSMUST00000176884 69 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm25156-201ENSMUST00000179809 79 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm27999-201ENSMUST00000183539 193 ntBASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trav13d-3J3QMG8 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms