Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Gm27245-201ENSMUST00000184385 376 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Gm2497-201ENSMUST00000189539 601 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Gm9442-201ENSMUST00000194242 319 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Gm43724-201ENSMUST00000197516 226 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 AC125374.2-201ENSMUST00000214278 162 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 AC164297.3-201ENSMUST00000224238 94 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Mir31-201ENSMUST00000083474 106 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Prpf40aQ9R1C7 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm12010-201ENSMUST00000122400 2017 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 n-R5s52-201ENSMUST00000104614 113 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm12039-201ENSMUST00000118219 180 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm22482-201ENSMUST00000122563 359 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm16345-201ENSMUST00000146065 158 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Mir5098-201ENSMUST00000175320 82 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm26585-201ENSMUST00000180890 630 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm42663-201ENSMUST00000199883 351 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm44583-201ENSMUST00000207478 281 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm44648-201ENSMUST00000208267 329 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm45498-201ENSMUST00000210346 283 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm6049-201ENSMUST00000222369 458 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm9512-201ENSMUST00000223112 497 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm26066-201ENSMUST00000083385 109 ntBASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Prpf40aQ9R1C7 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm22496-201ENSMUST00000104493 88 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm15357-201ENSMUST00000119160 285 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm11718-201ENSMUST00000119942 537 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm11506-201ENSMUST00000122414 470 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm27723-201ENSMUST00000157398 63 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm27510-201ENSMUST00000158214 64 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm25175-201ENSMUST00000178712 79 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm9696-202ENSMUST00000191541 830 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Ighv1-32-201ENSMUST00000195149 351 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm42694-201ENSMUST00000196951 358 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm18325-201ENSMUST00000203228 835 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm45296-201ENSMUST00000209625 205 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm40692-201ENSMUST00000220411 491 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 AC125223.1-203ENSMUST00000225304 498 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 AC164297.1-201ENSMUST00000224484 1561 ntBASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Prpf40aQ9R1C7 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
Prpf40aQ9R1C7 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms