Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm12386-201ENSMUST00000117380 688 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm12261-201ENSMUST00000117499 645 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm12311-201ENSMUST00000118803 374 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm11262-201ENSMUST00000119326 833 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm14049-201ENSMUST00000121009 636 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm25369-201ENSMUST00000158848 132 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm25835-201ENSMUST00000158917 144 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm2389-201ENSMUST00000160487 189 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm8747-201ENSMUST00000195392 751 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm44011-201ENSMUST00000203336 394 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm19140-201ENSMUST00000209790 421 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm20039-201ENSMUST00000210329 394 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 AC154600.1-201ENSMUST00000226480 714 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm25480-201ENSMUST00000083217 133 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm23970-201ENSMUST00000083319 107 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.42□□□□□ -1.7
Ddx55Q6ZPL9 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm24831-201ENSMUST00000116778 126 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm13082-201ENSMUST00000118877 561 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm15026-201ENSMUST00000119219 458 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm11704-201ENSMUST00000120031 214 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm15212-201ENSMUST00000122403 466 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm23326-201ENSMUST00000157419 105 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm23332-201ENSMUST00000157424 275 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm22310-201ENSMUST00000157509 116 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm17919-201ENSMUST00000173344 312 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm25535-201ENSMUST00000175364 125 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm24100-201ENSMUST00000178592 79 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm24137-201ENSMUST00000180055 79 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm22391-201ENSMUST00000180356 79 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm44149-201ENSMUST00000204256 226 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm5001-201ENSMUST00000204361 331 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm45080-201ENSMUST00000206648 283 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm45614-201ENSMUST00000209994 721 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm39197-201ENSMUST00000212069 457 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm22740-201ENSMUST00000083439 109 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ddx55Q6ZPL9 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Ddx55Q6ZPL9 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.4□□□□□ -1.7
Ddx55Q6ZPL9 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.4□□□□□ -1.7
Ddx55Q6ZPL9 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.4□□□□□ -1.7
Ddx55Q6ZPL9 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm7071-201ENSMUST00000120458 462 ntBASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm28010-201ENSMUST00000179485 126 ntBASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm26701-201ENSMUST00000181571 234 ntBASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm27249-201ENSMUST00000185049 328 ntBASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Mir6418-201ENSMUST00000185075 115 ntBASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm29334-201ENSMUST00000190334 357 ntBASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm37732-201ENSMUST00000194377 316 ntBASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.4□□□□□ -1.71
Ddx55Q6ZPL9 Gm45105-201ENSMUST00000207824 397 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms