Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm37219-201ENSMUST00000192036 926 ntBASIC2.24□□□□□ -2.05
Nkx3-1P97436 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.24□□□□□ -2.05
Nkx3-1P97436 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC2.24□□□□□ -2.05
Nkx3-1P97436 Gm37418-201ENSMUST00000195031 274 ntBASIC2.24□□□□□ -2.05
Nkx3-1P97436 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Nkx3-1P97436 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.24□□□□□ -2.05
Nkx3-1P97436 Gm43991-201ENSMUST00000203751 274 ntBASIC2.24□□□□□ -2.05
Nkx3-1P97436 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Nkx3-1P97436 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.24□□□□□ -2.05
Nkx3-1P97436 Gm18704-201ENSMUST00000219736 446 ntBASIC2.24□□□□□ -2.05
Nkx3-1P97436 CT009733.1-201ENSMUST00000225322 425 ntBASIC2.24□□□□□ -2.05
Nkx3-1P97436 Gm22005-201ENSMUST00000082795 141 ntBASIC2.24□□□□□ -2.05
Nkx3-1P97436 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nkx3-1P97436 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.24□□□□□ -2.05
Nkx3-1P97436 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
Nkx3-1P97436 Mir804-201ENSMUST00000103251 95 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm12587-201ENSMUST00000120180 427 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm7350-201ENSMUST00000120964 636 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm12313-201ENSMUST00000121347 421 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm24592-201ENSMUST00000122505 106 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm23792-201ENSMUST00000122557 93 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm13901-201ENSMUST00000137252 468 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm3104-201ENSMUST00000171004 473 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm25642-201ENSMUST00000175137 66 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm27330-201ENSMUST00000184689 132 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm37866-201ENSMUST00000191950 696 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm42976-201ENSMUST00000200313 222 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm44903-201ENSMUST00000206840 130 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm18892-201ENSMUST00000217628 881 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm4263-202ENSMUST00000221392 667 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Nkx3-1P97436 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Nkx3-1P97436 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.23□□□□□ -2.05
Nkx3-1P97436 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm24715-201ENSMUST00000102377 95 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm23803-201ENSMUST00000104610 132 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm7123-201ENSMUST00000117647 213 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm14841-201ENSMUST00000121067 758 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm14800-201ENSMUST00000122084 1272 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Defa-ps12-201ENSMUST00000122353 193 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm25945-201ENSMUST00000122484 135 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm26487-201ENSMUST00000158022 94 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm22666-201ENSMUST00000158717 164 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Snord53-201ENSMUST00000175146 78 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm29335-201ENSMUST00000188361 459 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm38329-201ENSMUST00000193473 427 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Nkx3-1P97436 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Nkx3-1P97436 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm7540-201ENSMUST00000219764 926 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC2.22□□□□□ -2.05
Nkx3-1P97436 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Nkx3-1P97436 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Nkx3-1P97436 Mir325-201ENSMUST00000083491 98 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm25007-201ENSMUST00000083808 133 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Gm24698-201ENSMUST00000083883 130 ntBASIC2.22□□□□□ -2.05
Nkx3-1P97436 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Nkx3-1P97436 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Nkx3-1P97436 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Nkx3-1P97436 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Nkx3-1P97436 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm22019-201ENSMUST00000104359 96 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm26015-201ENSMUST00000104402 125 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm16383-201ENSMUST00000118122 232 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm14982-201ENSMUST00000121102 442 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm22208-201ENSMUST00000122658 110 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm23889-201ENSMUST00000122689 104 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm22651-201ENSMUST00000157872 94 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm16236-201ENSMUST00000159588 379 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm8580-201ENSMUST00000160295 464 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm24082-201ENSMUST00000175175 83 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm27608-201ENSMUST00000184822 162 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm19224-201ENSMUST00000190477 793 ntBASIC2.21□□□□□ -2.06
Nkx3-1P97436 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms