Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.05□□□□□ -1.76
Hoxd4P10628 Trav20-201ENSMUST00000142754 347 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm3027-201ENSMUST00000167579 451 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm3104-201ENSMUST00000171004 473 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm24167-201ENSMUST00000177733 124 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm24028-201ENSMUST00000178991 124 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm19498-201ENSMUST00000191128 331 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm38044-201ENSMUST00000192964 487 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm43586-201ENSMUST00000195948 310 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm42925-201ENSMUST00000197359 285 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.05□□□□□ -1.76
Hoxd4P10628 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm45704-201ENSMUST00000212582 403 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Hoxd4P10628 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.05□□□□□ -1.76
Hoxd4P10628 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm29785-201ENSMUST00000217033 383 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm26164-201ENSMUST00000083793 104 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Hoxd4P10628 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Hoxd4P10628 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Hoxd4P10628 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Hoxd4P10628 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Hoxd4P10628 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd4P10628 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd4P10628 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm22778-201ENSMUST00000104090 128 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm13664-201ENSMUST00000117304 345 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm15180-201ENSMUST00000117745 492 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm14878-201ENSMUST00000118167 293 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm14570-201ENSMUST00000119444 391 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm11790-201ENSMUST00000119569 455 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm13511-201ENSMUST00000121167 363 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd4P10628 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm24676-201ENSMUST00000158758 75 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm3053-201ENSMUST00000161709 616 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm28957-201ENSMUST00000190174 373 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm22897-201ENSMUST00000197860 128 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm8745-201ENSMUST00000207846 782 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm17779-201ENSMUST00000213395 394 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm19790-201ENSMUST00000214414 251 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.04□□□□□ -1.76
Hoxd4P10628 AL627387.1-201ENSMUST00000226063 250 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm22974-201ENSMUST00000083301 103 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd4P10628 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd4P10628 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.04□□□□□ -1.76
Hoxd4P10628 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Hoxd4P10628 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd4P10628 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd4P10628 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd4P10628 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.03□□□□□ -1.76
Hoxd4P10628 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd4P10628 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd4P10628 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.03□□□□□ -1.76
Hoxd4P10628 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hoxd4P10628 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Hoxd4P10628 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
Hoxd4P10628 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
Hoxd4P10628 Gm25418-201ENSMUST00000104214 129 ntBASIC4.03□□□□□ -1.76
Hoxd4P10628 Gm14823-201ENSMUST00000117698 238 ntBASIC4.03□□□□□ -1.76
Hoxd4P10628 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hoxd4P10628 Gm25920-201ENSMUST00000158307 99 ntBASIC4.03□□□□□ -1.76
Hoxd4P10628 Gm24577-201ENSMUST00000158580 63 ntBASIC4.03□□□□□ -1.76
Hoxd4P10628 Gm26400-201ENSMUST00000175012 85 ntBASIC4.03□□□□□ -1.76
Hoxd4P10628 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.03□□□□□ -1.76
Hoxd4P10628 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms