Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Gm43224-201ENSMUST00000201567 898 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Gm43929-201ENSMUST00000203025 409 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Gm24771-201ENSMUST00000158508 137 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Mir3098-201ENSMUST00000175416 87 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Gm25813-201ENSMUST00000082748 191 ntBASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Col6a3E9PWQ3 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC2.03□□□□□ -2.09
Col6a3E9PWQ3 Gm7164-201ENSMUST00000117503 450 ntBASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Gm22340-201ENSMUST00000157717 114 ntBASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Gm18043-201ENSMUST00000216741 739 ntBASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Gm18346-201ENSMUST00000216782 325 ntBASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Gm25628-201ENSMUST00000084002 105 ntBASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Gm26387-201ENSMUST00000104238 132 ntBASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Mir294-201ENSMUST00000104710 84 ntBASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col6a3E9PWQ3 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Snord53-201ENSMUST00000175146 78 ntBASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Gm19257-201ENSMUST00000186121 183 ntBASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Gm23760-201ENSMUST00000158350 116 ntBASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Gm22093-201ENSMUST00000158980 111 ntBASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Gm27608-201ENSMUST00000184822 162 ntBASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Gm24044-201ENSMUST00000083107 156 ntBASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Col6a3E9PWQ3 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2□□□□□ -2.09
Col6a3E9PWQ3 Gm19641-201ENSMUST00000188432 417 ntBASIC2□□□□□ -2.09
Col6a3E9PWQ3 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
Col6a3E9PWQ3 Gm25416-201ENSMUST00000104221 107 ntBASIC2□□□□□ -2.09
Col6a3E9PWQ3 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC2□□□□□ -2.09
Col6a3E9PWQ3 Gm37911-201ENSMUST00000193099 1545 ntBASIC2□□□□□ -2.09
Col6a3E9PWQ3 Gm23329-201ENSMUST00000157415 108 ntBASIC2□□□□□ -2.09
Col6a3E9PWQ3 Gm24902-201ENSMUST00000158126 123 ntBASIC2□□□□□ -2.09
Col6a3E9PWQ3 Gm23467-201ENSMUST00000157127 159 ntBASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Gm22330-201ENSMUST00000158068 115 ntBASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 AL603834.1-201ENSMUST00000198372 121 ntBASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Gm37054-201ENSMUST00000193481 543 ntBASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Mir219b-201ENSMUST00000198317 65 ntBASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 AC154838.2-201ENSMUST00000226602 747 ntBASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Gm24890-201ENSMUST00000104389 102 ntBASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Gm23342-201ENSMUST00000158958 115 ntBASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col6a3E9PWQ3 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 Gm13340-201ENSMUST00000117219 1545 ntBASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 Gm38238-201ENSMUST00000194334 346 ntBASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC1.98□□□□□ -2.09
Col6a3E9PWQ3 CT030135.1-201ENSMUST00000223760 570 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms