Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm25728-201ENSMUST00000104525 159 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm12268-201ENSMUST00000118398 442 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm14647-201ENSMUST00000119392 680 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm25107-201ENSMUST00000122472 129 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm22026-201ENSMUST00000122735 281 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm25981-201ENSMUST00000157921 295 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm20672-201ENSMUST00000176605 261 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.5□□□□□ -1.85
Smc1aQ9CU62 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm28785-201ENSMUST00000187478 379 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm43541-201ENSMUST00000197208 581 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm43224-201ENSMUST00000201567 898 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm23615-201ENSMUST00000082602 65 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm25126-201ENSMUST00000083343 102 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.5□□□□□ -1.85
Smc1aQ9CU62 Gm15090-201ENSMUST00000118787 1196 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm12891-201ENSMUST00000119358 240 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm15190-201ENSMUST00000120855 276 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm14979-201ENSMUST00000121561 1035 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm15089-201ENSMUST00000122332 1196 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm10075-201ENSMUST00000162030 545 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm24019-201ENSMUST00000178620 107 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm26243-201ENSMUST00000179260 107 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm24968-201ENSMUST00000179817 107 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm19498-201ENSMUST00000191128 331 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm6510-201ENSMUST00000195916 574 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm5551-201ENSMUST00000199720 690 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm43992-201ENSMUST00000204358 197 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm44964-201ENSMUST00000207011 273 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm45023-201ENSMUST00000207951 379 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm45530-201ENSMUST00000211658 225 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm19987-201ENSMUST00000216339 499 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm23296-201ENSMUST00000082555 107 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Gm24859-201ENSMUST00000082729 107 ntBASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Smc1aQ9CU62 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm14879-201ENSMUST00000117308 507 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm15282-201ENSMUST00000117707 300 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm15986-201ENSMUST00000122153 400 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm16129-201ENSMUST00000152628 486 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm23668-201ENSMUST00000157465 111 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm24819-201ENSMUST00000175094 166 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Mir6411-201ENSMUST00000183556 108 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Mir6917-201ENSMUST00000184111 61 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm27964-201ENSMUST00000185195 62 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC3.48□□□□□ -1.85
Smc1aQ9CU62 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Smc1aQ9CU62 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm25203-202ENSMUST00000200458 216 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 AC131743.3-201ENSMUST00000222099 662 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm17872-201ENSMUST00000222550 532 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Smc1aQ9CU62 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 AC156574.2-201ENSMUST00000228023 282 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm25203-201ENSMUST00000082842 215 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Gm25792-201ENSMUST00000083289 100 ntBASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Smc1aQ9CU62 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Gm2003-201ENSMUST00000118537 636 ntBASIC3.47□□□□□ -1.85
Smc1aQ9CU62 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms