Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim56Q80VI1 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm28634-201ENSMUST00000191087 2613 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim56Q80VI1 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim56Q80VI1 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm13378-201ENSMUST00000117483 336 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm22843-201ENSMUST00000157710 134 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm22211-201ENSMUST00000158097 156 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm24618-201ENSMUST00000177718 94 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm23953-201ENSMUST00000178214 94 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm26332-201ENSMUST00000179813 94 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm22863-201ENSMUST00000180265 94 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm29479-201ENSMUST00000190352 455 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm37732-201ENSMUST00000194377 316 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm42579-201ENSMUST00000200512 734 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 AC159203.2-201ENSMUST00000221326 193 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 AC133156.1-202ENSMUST00000227284 363 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm2710-201ENSMUST00000073196 603 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm5670-201ENSMUST00000093546 372 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.12□□□□□ -1.59
Trim56Q80VI1 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim56Q80VI1 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm2066-201ENSMUST00000118046 389 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm14753-201ENSMUST00000118503 246 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm25965-201ENSMUST00000157170 93 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm17109-201ENSMUST00000163985 358 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm3851-201ENSMUST00000168653 318 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm20526-201ENSMUST00000173416 158 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm26622-201ENSMUST00000180520 298 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm29512-201ENSMUST00000185544 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28110-201ENSMUST00000185782 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28838-201ENSMUST00000186338 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm29057-201ENSMUST00000186468 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm29661-201ENSMUST00000186781 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28737-201ENSMUST00000186808 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm29118-201ENSMUST00000186908 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28433-201ENSMUST00000187085 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm29635-201ENSMUST00000187221 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28759-201ENSMUST00000187621 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28831-201ENSMUST00000187739 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28200-201ENSMUST00000187778 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm29026-201ENSMUST00000187787 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28860-201ENSMUST00000188103 313 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28752-201ENSMUST00000188340 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28797-201ENSMUST00000188543 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28855-201ENSMUST00000188680 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm29378-201ENSMUST00000188723 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28569-201ENSMUST00000188748 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28120-201ENSMUST00000188812 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28369-201ENSMUST00000188993 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm29037-201ENSMUST00000189092 313 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28909-201ENSMUST00000189406 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28705-201ENSMUST00000189548 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28861-201ENSMUST00000189681 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm29180-201ENSMUST00000190003 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28939-201ENSMUST00000190351 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm28223-201ENSMUST00000190469 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm29575-201ENSMUST00000190597 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm29092-201ENSMUST00000190768 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm29469-201ENSMUST00000191448 315 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm44853-201ENSMUST00000209070 250 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim56Q80VI1 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim56Q80VI1 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm46369-201ENSMUST00000221577 401 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm24045-201ENSMUST00000083113 98 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm25755-201ENSMUST00000083396 107 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 n-R5s151-201ENSMUST00000083959 119 ntBASIC5.11□□□□□ -1.59
Trim56Q80VI1 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim56Q80VI1 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 134.7 ms