Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm12383-201ENSMUST00000120628 760 ntBASIC2.74□□□□□ -1.97
Six4Q61321 Gm11321-201ENSMUST00000121257 902 ntBASIC2.74□□□□□ -1.97
Six4Q61321 Gm17194-201ENSMUST00000164610 348 ntBASIC2.74□□□□□ -1.97
Six4Q61321 Snord53-201ENSMUST00000175146 78 ntBASIC2.74□□□□□ -1.97
Six4Q61321 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Six4Q61321 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.74□□□□□ -1.97
Six4Q61321 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.74□□□□□ -1.97
Six4Q61321 Gm17935-201ENSMUST00000196649 772 ntBASIC2.74□□□□□ -1.97
Six4Q61321 Gm34314-201ENSMUST00000203622 367 ntBASIC2.74□□□□□ -1.97
Six4Q61321 Gm6012-201ENSMUST00000210821 730 ntBASIC2.74□□□□□ -1.97
Six4Q61321 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Six4Q61321 Gm7422-201ENSMUST00000220115 640 ntBASIC2.74□□□□□ -1.97
Six4Q61321 Platr25-208ENSMUST00000222602 939 ntBASIC2.74□□□□□ -1.97
Six4Q61321 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.74□□□□□ -1.97
Six4Q61321 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.74□□□□□ -1.97
Six4Q61321 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Six4Q61321 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.74□□□□□ -1.97
Six4Q61321 Gm22249-201ENSMUST00000082485 136 ntBASIC2.74□□□□□ -1.97
Six4Q61321 Gm22507-201ENSMUST00000082773 160 ntBASIC2.74□□□□□ -1.97
Six4Q61321 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
Six4Q61321 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Six4Q61321 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.73□□□□□ -1.97
Six4Q61321 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Six4Q61321 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Six4Q61321 Gm23128-201ENSMUST00000104257 132 ntBASIC2.73□□□□□ -1.97
Six4Q61321 Gm22718-201ENSMUST00000122701 315 ntBASIC2.73□□□□□ -1.97
Six4Q61321 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.73□□□□□ -1.97
Six4Q61321 Gm27786-201ENSMUST00000184337 70 ntBASIC2.73□□□□□ -1.97
Six4Q61321 Mir6401-201ENSMUST00000184499 109 ntBASIC2.73□□□□□ -1.97
Six4Q61321 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Six4Q61321 Gm23128-202ENSMUST00000196578 133 ntBASIC2.73□□□□□ -1.97
Six4Q61321 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.73□□□□□ -1.97
Six4Q61321 Gm43407-201ENSMUST00000199816 317 ntBASIC2.73□□□□□ -1.97
Six4Q61321 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.73□□□□□ -1.97
Six4Q61321 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.73□□□□□ -1.97
Six4Q61321 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Six4Q61321 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Six4Q61321 Gm23264-201ENSMUST00000083372 107 ntBASIC2.73□□□□□ -1.97
Six4Q61321 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Six4Q61321 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.73□□□□□ -1.97
Six4Q61321 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
Six4Q61321 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Six4Q61321 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Six4Q61321 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Six4Q61321 Gm23431-201ENSMUST00000104006 107 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm15125-201ENSMUST00000116185 800 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm2066-201ENSMUST00000118046 389 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm2318-201ENSMUST00000119623 639 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm2005-201ENSMUST00000120759 542 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
Six4Q61321 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.72□□□□□ -1.97
Six4Q61321 Gm24060-201ENSMUST00000157494 95 ntBASIC2.72□□□□□ -1.97
Six4Q61321 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.72□□□□□ -1.97
Six4Q61321 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Six4Q61321 Gm24082-201ENSMUST00000175175 83 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm7438-201ENSMUST00000177664 639 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm7408-201ENSMUST00000178014 639 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm7386-201ENSMUST00000178020 639 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm3657-201ENSMUST00000178170 639 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm7415-201ENSMUST00000178205 639 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm7398-201ENSMUST00000178589 639 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm7391-201ENSMUST00000178680 639 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Six4Q61321 Gm7375-201ENSMUST00000179232 639 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm3681-201ENSMUST00000179940 639 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Six4Q61321 Gm27330-201ENSMUST00000184689 132 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm44137-201ENSMUST00000203670 367 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm44425-201ENSMUST00000203739 429 ntBASIC2.72□□□□□ -1.97
Six4Q61321 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.72□□□□□ -1.97
Six4Q61321 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.72□□□□□ -1.97
Six4Q61321 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Six4Q61321 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Six4Q61321 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Six4Q61321 Gm22293-201ENSMUST00000083314 109 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Six4Q61321 Gm42736-201ENSMUST00000200723 1353 ntBASIC2.72□□□□□ -1.97
Six4Q61321 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Six4Q61321 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
Six4Q61321 Gm11898-201ENSMUST00000117161 385 ntBASIC2.71□□□□□ -1.98
Six4Q61321 Gm16171-201ENSMUST00000118004 324 ntBASIC2.71□□□□□ -1.98
Six4Q61321 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.71□□□□□ -1.98
Six4Q61321 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC2.71□□□□□ -1.98
Six4Q61321 Gm12891-201ENSMUST00000119358 240 ntBASIC2.71□□□□□ -1.98
Six4Q61321 Gm5937-201ENSMUST00000119715 643 ntBASIC2.71□□□□□ -1.98
Six4Q61321 Gm11575-201ENSMUST00000122243 228 ntBASIC2.71□□□□□ -1.98
Six4Q61321 Gm15274-201ENSMUST00000131442 291 ntBASIC2.71□□□□□ -1.98
Six4Q61321 Gm21979-201ENSMUST00000139887 291 ntBASIC2.71□□□□□ -1.98
Six4Q61321 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
Six4Q61321 Gm15259-201ENSMUST00000151262 291 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms