Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ssbp4Q3U4B1 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ssbp4Q3U4B1 Gm23925-201ENSMUST00000082471 132 ntBASIC3.13□□□□□ -1.91
Ssbp4Q3U4B1 Gm23939-201ENSMUST00000082880 133 ntBASIC3.13□□□□□ -1.91
Ssbp4Q3U4B1 Gm16261-201ENSMUST00000096813 205 ntBASIC3.13□□□□□ -1.91
Ssbp4Q3U4B1 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ssbp4Q3U4B1 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.13□□□□□ -1.91
Ssbp4Q3U4B1 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ssbp4Q3U4B1 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ssbp4Q3U4B1 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ssbp4Q3U4B1 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm12268-201ENSMUST00000118398 442 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm15377-201ENSMUST00000119594 246 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm13356-201ENSMUST00000121678 335 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm24244-201ENSMUST00000157317 130 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm20415-201ENSMUST00000172877 423 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm25748-201ENSMUST00000175487 70 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm26177-201ENSMUST00000178683 107 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm21960-201ENSMUST00000181924 452 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm27313-201ENSMUST00000183500 142 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Mir6541-201ENSMUST00000183649 110 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm28146-201ENSMUST00000185517 701 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm37119-201ENSMUST00000195691 389 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm42438-201ENSMUST00000197832 974 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm5551-201ENSMUST00000199720 690 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm44355-201ENSMUST00000200417 104 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm44923-201ENSMUST00000206673 85 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm44754-201ENSMUST00000208155 400 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm7495-201ENSMUST00000215099 426 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm19219-201ENSMUST00000215863 724 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm3442-201ENSMUST00000216808 710 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Olfr936-202ENSMUST00000216912 937 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm18116-201ENSMUST00000220920 537 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm9762-201ENSMUST00000036976 444 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Rny3-201ENSMUST00000083011 102 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm25480-201ENSMUST00000083217 133 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Snord15a-201ENSMUST00000083888 148 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ssbp4Q3U4B1 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm25563-201ENSMUST00000104603 74 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm13664-201ENSMUST00000117304 345 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm15060-201ENSMUST00000119550 948 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm14815-201ENSMUST00000120060 488 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm7916-201ENSMUST00000120325 456 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm15177-201ENSMUST00000120491 577 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm14845-201ENSMUST00000121259 306 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm22107-201ENSMUST00000122548 100 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm16101-201ENSMUST00000160695 430 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm27903-201ENSMUST00000175482 126 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Mir6393-201ENSMUST00000183709 94 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm19694-201ENSMUST00000192364 505 ntBASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.11□□□□□ -1.91
Ssbp4Q3U4B1 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms