Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.17□□□□□ -1.9
Cux1P53564 Gm2389-201ENSMUST00000160487 189 ntBASIC3.17□□□□□ -1.9
Cux1P53564 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Cux1P53564 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.17□□□□□ -1.9
Cux1P53564 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.17□□□□□ -1.9
Cux1P53564 Defa-ps18-201ENSMUST00000098889 371 ntBASIC3.17□□□□□ -1.9
Cux1P53564 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.17□□□□□ -1.9
Cux1P53564 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cux1P53564 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.16□□□□□ -1.9
Cux1P53564 Gm23060-201ENSMUST00000102345 109 ntBASIC3.16□□□□□ -1.9
Cux1P53564 Gm24394-201ENSMUST00000158141 123 ntBASIC3.16□□□□□ -1.9
Cux1P53564 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Cux1P53564 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC3.16□□□□□ -1.9
Cux1P53564 Gm22108-201ENSMUST00000177961 106 ntBASIC3.16□□□□□ -1.9
Cux1P53564 Gm24798-201ENSMUST00000179334 106 ntBASIC3.16□□□□□ -1.9
Cux1P53564 Mir6405-201ENSMUST00000184584 124 ntBASIC3.16□□□□□ -1.9
Cux1P53564 Gm38214-201ENSMUST00000192581 988 ntBASIC3.16□□□□□ -1.9
Cux1P53564 Gm44845-201ENSMUST00000208773 335 ntBASIC3.16□□□□□ -1.9
Cux1P53564 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.16□□□□□ -1.9
Cux1P53564 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC3.16□□□□□ -1.9
Cux1P53564 AC129085.5-201ENSMUST00000225468 400 ntBASIC3.16□□□□□ -1.9
Cux1P53564 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Cux1P53564 Snora69-201ENSMUST00000083708 131 ntBASIC3.16□□□□□ -1.9
Cux1P53564 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Cux1P53564 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Cux1P53564 Gm15162-201ENSMUST00000119325 283 ntBASIC3.15□□□□□ -1.9
Cux1P53564 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Cux1P53564 Gm23702-201ENSMUST00000158840 130 ntBASIC3.15□□□□□ -1.9
Cux1P53564 Trbv18-201ENSMUST00000194256 294 ntBASIC3.15□□□□□ -1.9
Cux1P53564 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.15□□□□□ -1.9
Cux1P53564 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Cux1P53564 Gm26922-201ENSMUST00000082687 72 ntBASIC3.15□□□□□ -1.9
Cux1P53564 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Cux1P53564 Gm7974-201ENSMUST00000117154 408 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Gm25836-201ENSMUST00000158918 123 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cux1P53564 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cux1P53564 Gm24638-201ENSMUST00000179807 132 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Gm26864-201ENSMUST00000181346 156 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Gm19193-201ENSMUST00000190263 590 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Gm38080-201ENSMUST00000194035 268 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Gm44533-201ENSMUST00000207782 268 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cux1P53564 Gm22683-201ENSMUST00000082854 137 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Gm24661-201ENSMUST00000083205 104 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cux1P53564 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cux1P53564 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Cux1P53564 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cux1P53564 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cux1P53564 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cux1P53564 Gm37162-201ENSMUST00000191708 551 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.14□□□□□ -1.91
Cux1P53564 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC3.14□□□□□ -1.91
Cux1P53564 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC3.14□□□□□ -1.91
Cux1P53564 AC115735.3-201ENSMUST00000227757 513 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cux1P53564 Mir365-2-201ENSMUST00000083555 112 ntBASIC3.14□□□□□ -1.91
Cux1P53564 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Cux1P53564 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cux1P53564 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cux1P53564 Gm22858-201ENSMUST00000174972 76 ntBASIC3.13□□□□□ -1.91
Cux1P53564 Mir6352-201ENSMUST00000184495 116 ntBASIC3.13□□□□□ -1.91
Cux1P53564 Gm27753-201ENSMUST00000184742 203 ntBASIC3.13□□□□□ -1.91
Cux1P53564 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.13□□□□□ -1.91
Cux1P53564 Gm17838-201ENSMUST00000205872 876 ntBASIC3.13□□□□□ -1.91
Cux1P53564 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.13□□□□□ -1.91
Cux1P53564 Gm7214-201ENSMUST00000222428 272 ntBASIC3.13□□□□□ -1.91
Cux1P53564 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.13□□□□□ -1.91
Cux1P53564 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Cux1P53564 Gm37824-201ENSMUST00000193430 3236 ntBASIC3.12□□□□□ -1.91
Cux1P53564 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cux1P53564 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.12□□□□□ -1.91
Cux1P53564 Gm15900-201ENSMUST00000161584 342 ntBASIC3.12□□□□□ -1.91
Cux1P53564 Gm17177-201ENSMUST00000169144 483 ntBASIC3.12□□□□□ -1.91
Cux1P53564 Gm37616-201ENSMUST00000193974 322 ntBASIC3.12□□□□□ -1.91
Cux1P53564 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Cux1P53564 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.12□□□□□ -1.91
Cux1P53564 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Cux1P53564 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cux1P53564 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cux1P53564 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.11□□□□□ -1.91
Cux1P53564 Gm21489-201ENSMUST00000189668 818 ntBASIC3.11□□□□□ -1.91
Cux1P53564 Gm19057-201ENSMUST00000194329 1197 ntBASIC3.11□□□□□ -1.91
Cux1P53564 Gm43841-201ENSMUST00000199491 586 ntBASIC3.11□□□□□ -1.91
Cux1P53564 Gm7039-201ENSMUST00000205138 346 ntBASIC3.11□□□□□ -1.91
Cux1P53564 Gm44694-201ENSMUST00000205317 1298 ntBASIC3.11□□□□□ -1.91
Cux1P53564 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cux1P53564 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC3.11□□□□□ -1.91
Cux1P53564 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cux1P53564 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cux1P53564 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cux1P53564 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cux1P53564 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.1□□□□□ -1.91
Cux1P53564 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cux1P53564 Gm13743-201ENSMUST00000121486 724 ntBASIC3.1□□□□□ -1.91
Cux1P53564 Gm13868-201ENSMUST00000122411 294 ntBASIC3.1□□□□□ -1.91
Cux1P53564 Gm18595-201ENSMUST00000175736 1068 ntBASIC3.1□□□□□ -1.91
Cux1P53564 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms