Protein–RNA interactions for Protein: Q9QXD8

Limd1, LIM domain-containing protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1Q9QXD8 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Limd1Q9QXD8 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm11673-201ENSMUST00000117846 331 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm11790-201ENSMUST00000119569 455 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm14037-201ENSMUST00000120576 313 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm11506-201ENSMUST00000122414 470 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm24217-201ENSMUST00000158260 133 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm25654-201ENSMUST00000158467 88 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm24167-201ENSMUST00000177733 124 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm22852-201ENSMUST00000177899 101 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm24487-201ENSMUST00000178017 63 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm24028-201ENSMUST00000178991 124 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm29657-201ENSMUST00000189807 342 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm28957-201ENSMUST00000190174 373 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm45002-201ENSMUST00000208045 120 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm45380-201ENSMUST00000210465 315 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm5750-201ENSMUST00000218711 801 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 AC165138.1-201ENSMUST00000226984 270 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm22061-201ENSMUST00000082557 107 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm36969-201ENSMUST00000194551 2809 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Limd1Q9QXD8 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC5.63□□□□□ -1.51
Limd1Q9QXD8 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm12125-201ENSMUST00000117261 736 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm24481-201ENSMUST00000157210 102 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm23474-201ENSMUST00000158884 75 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm3370-201ENSMUST00000171785 500 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Mir5129-201ENSMUST00000174938 78 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm27688-201ENSMUST00000183634 91 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm18956-201ENSMUST00000192857 480 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm45273-201ENSMUST00000211559 281 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm18921-201ENSMUST00000221798 366 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 AC158395.1-201ENSMUST00000227206 452 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 AC158805.1-201ENSMUST00000218197 2631 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Limd1Q9QXD8 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Gm11584-201ENSMUST00000120636 325 ntBASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC5.61□□□□□ -1.51
Limd1Q9QXD8 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Gm19123-201ENSMUST00000190716 651 ntBASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Gm37162-201ENSMUST00000191708 551 ntBASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Gm37601-201ENSMUST00000194922 394 ntBASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Gm9402-201ENSMUST00000196849 388 ntBASIC5.61□□□□□ -1.51
Limd1Q9QXD8 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms