Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm28397-201ENSMUST00000187970 699 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm28896-201ENSMUST00000188609 696 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm29339-201ENSMUST00000189613 696 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm28159-201ENSMUST00000190296 696 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm29366-201ENSMUST00000190481 699 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm29407-201ENSMUST00000191468 696 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm38107-201ENSMUST00000194873 696 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm23128-202ENSMUST00000196578 133 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm42474-201ENSMUST00000201073 505 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm24096-201ENSMUST00000103905 110 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm9001-201ENSMUST00000121642 399 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm24291-201ENSMUST00000157633 162 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm15974-201ENSMUST00000159103 531 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm19244-201ENSMUST00000204340 253 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm18704-201ENSMUST00000219736 446 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm24951-201ENSMUST00000102182 109 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm23256-201ENSMUST00000102235 110 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Mir499-201ENSMUST00000102357 79 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm14795-201ENSMUST00000118461 471 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm8880-201ENSMUST00000121800 454 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm22208-201ENSMUST00000122658 110 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm22961-201ENSMUST00000157964 106 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Mir5118-201ENSMUST00000175551 67 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm5731-201ENSMUST00000190969 481 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm38281-201ENSMUST00000192301 315 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm38213-201ENSMUST00000193203 173 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm46234-201ENSMUST00000218702 259 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Gm2436-201ENSMUST00000219562 774 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Mir421-201ENSMUST00000083575 76 ntBASIC2.97□□□□□ -1.93
Scn5aQ9JJV9 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
Scn5aQ9JJV9 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Gm25529-201ENSMUST00000104850 92 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Gm17038-201ENSMUST00000166586 494 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Gm25944-201ENSMUST00000178758 94 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Gm28628-201ENSMUST00000187006 264 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Gm28629-201ENSMUST00000187309 263 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Gm37599-201ENSMUST00000193067 489 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Gm44212-201ENSMUST00000205016 897 ntBASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Scn5aQ9JJV9 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.95□□□□□ -1.94
Scn5aQ9JJV9 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Scn5aQ9JJV9 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Scn5aQ9JJV9 Gm15272-201ENSMUST00000120865 233 ntBASIC2.95□□□□□ -1.94
Scn5aQ9JJV9 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.95□□□□□ -1.94
Scn5aQ9JJV9 Gm22818-201ENSMUST00000157446 104 ntBASIC2.95□□□□□ -1.94
Scn5aQ9JJV9 Gm2966-201ENSMUST00000166052 481 ntBASIC2.95□□□□□ -1.94
Scn5aQ9JJV9 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms